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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs628506 chr5:176534423 A/C LOC388955 chr2:63849182-63850159:- -0.82 -21.49 3.5E-72 Box Plot
THCA rs628668 chr11:77577494 C/T INTS4L1 chr7:64601603-64694600:+ 0.6 9.79 9.75E-21 Box Plot
THCA rs629329 chr17:18280907 G/A CCDC144A chr17:16592851-16681195:+ 0.33 5.97 4.53E-9 Box Plot
THCA rs629329 chr17:18280907 G/A LOC162632 chr17:16614993-16707819:+ 0.54 9.68 2.4E-20 Box Plot
THCA rs629679 chr11:77536263 T/C INTS4L1 chr7:64601603-64694600:+ -0.6 -9.93 3.1E-21 Box Plot
THCA rs631907 chr17:18293405 G/A CCDC144A chr17:16592851-16681195:+ 0.35 6.24 9.66E-10 Box Plot
THCA rs631907 chr17:18293405 G/A LOC162632 chr17:16614993-16707819:+ 0.57 10.36 7.82E-23 Box Plot
THCA rs635195 chr11:77574637 G/C INTS4L1 chr7:64601603-64694600:+ 0.62 10 1.63E-21 Box Plot
THCA rs635976 chr11:49240229 G/A FOLH1B chr11:89372395-89431886:+ 0.48 7.93 1.62E-14 Box Plot
THCA rs636041 chr11:77586409 G/A INTS4L1 chr7:64601603-64694600:+ 0.44 7.98 1.09E-14 Box Plot
THCA rs636059 chr11:49249977 A/G FOLH1B chr11:89372395-89431886:+ 0.46 6.73 4.8E-11 Box Plot
THCA rs63682863 chr3:125684510 GATA/G ROPN1 chr3:123687368-123711025:- -0.32 -5.92 6.26E-9 Box Plot
THCA rs636971 chr11:77574249 C/T INTS4L1 chr7:64601603-64694600:+ 0.59 9.69 2.09E-20 Box Plot
THCA rs638416 chr17:18266975 G/C LOC162632 chr17:16614993-16707819:+ 0.35 6.15 1.6E-9 Box Plot
THCA rs640629 chr17:18257648 A/G LOC162632 chr17:16614993-16707819:+ 0.35 5.88 7.67E-9 Box Plot